Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9399 | 28420;28421;28422 | chr2:178710902;178710901;178710900 | chr2:179575629;179575628;179575627 |
N2AB | 9082 | 27469;27470;27471 | chr2:178710902;178710901;178710900 | chr2:179575629;179575628;179575627 |
N2A | 8155 | 24688;24689;24690 | chr2:178710902;178710901;178710900 | chr2:179575629;179575628;179575627 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.4 | None | 0.429 | 0.426 | 0.41883969893 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9698 | likely_pathogenic | 0.9815 | pathogenic | -3.12 | Highly Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | N |
F/C | 0.9202 | likely_pathogenic | 0.9549 | pathogenic | -2.11 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
F/D | 0.9962 | likely_pathogenic | 0.9976 | pathogenic | -3.178 | Highly Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
F/E | 0.9963 | likely_pathogenic | 0.9977 | pathogenic | -3.093 | Highly Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
F/G | 0.9901 | likely_pathogenic | 0.9928 | pathogenic | -3.441 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
F/H | 0.9706 | likely_pathogenic | 0.9804 | pathogenic | -1.618 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
F/I | 0.7171 | likely_pathogenic | 0.8487 | pathogenic | -2.098 | Highly Destabilizing | 0.4 | N | 0.429 | neutral | None | None | None | None | N |
F/K | 0.9946 | likely_pathogenic | 0.9965 | pathogenic | -1.849 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
F/L | 0.9705 | likely_pathogenic | 0.9821 | pathogenic | -2.098 | Highly Destabilizing | 0.135 | N | 0.328 | neutral | None | None | None | None | N |
F/M | 0.9172 | likely_pathogenic | 0.9499 | pathogenic | -1.922 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
F/N | 0.9898 | likely_pathogenic | 0.9946 | pathogenic | -1.972 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
F/P | 0.9929 | likely_pathogenic | 0.9954 | pathogenic | -2.443 | Highly Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
F/Q | 0.9915 | likely_pathogenic | 0.9945 | pathogenic | -2.214 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
F/R | 0.9823 | likely_pathogenic | 0.9868 | pathogenic | -0.984 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
F/S | 0.9611 | likely_pathogenic | 0.9775 | pathogenic | -2.639 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
F/T | 0.9637 | likely_pathogenic | 0.9796 | pathogenic | -2.462 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
F/V | 0.7555 | likely_pathogenic | 0.8674 | pathogenic | -2.443 | Highly Destabilizing | 0.911 | D | 0.77 | deleterious | None | None | None | None | N |
F/W | 0.8595 | likely_pathogenic | 0.9008 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
F/Y | 0.6637 | likely_pathogenic | 0.7445 | pathogenic | -1.157 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.