Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9382 | 28369;28370;28371 | chr2:178711092;178711091;178711090 | chr2:179575819;179575818;179575817 |
N2AB | 9065 | 27418;27419;27420 | chr2:178711092;178711091;178711090 | chr2:179575819;179575818;179575817 |
N2A | 8138 | 24637;24638;24639 | chr2:178711092;178711091;178711090 | chr2:179575819;179575818;179575817 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.989 | None | 0.529 | 0.471 | 0.503248607038 | gnomAD-4.0.0 | 3.23474E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.94724E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5912 | likely_pathogenic | 0.6412 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
A/D | 0.3345 | likely_benign | 0.4517 | ambiguous | 0.14 | Stabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | N |
A/E | 0.3388 | likely_benign | 0.4497 | ambiguous | 0.04 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/F | 0.4335 | ambiguous | 0.4957 | ambiguous | -0.88 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
A/G | 0.2449 | likely_benign | 0.2598 | benign | -0.631 | Destabilizing | 0.989 | D | 0.529 | neutral | None | None | None | None | N |
A/H | 0.5562 | ambiguous | 0.6281 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/I | 0.3119 | likely_benign | 0.3581 | ambiguous | -0.313 | Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | N |
A/K | 0.4638 | ambiguous | 0.5932 | pathogenic | -0.506 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/L | 0.3024 | likely_benign | 0.3367 | benign | -0.313 | Destabilizing | 0.992 | D | 0.661 | neutral | None | None | None | None | N |
A/M | 0.3404 | ambiguous | 0.3853 | ambiguous | -0.392 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
A/N | 0.3501 | ambiguous | 0.4084 | ambiguous | -0.216 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
A/P | 0.9548 | likely_pathogenic | 0.9762 | pathogenic | -0.336 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
A/Q | 0.3866 | ambiguous | 0.4748 | ambiguous | -0.403 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
A/R | 0.3898 | ambiguous | 0.4983 | ambiguous | -0.224 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
A/S | 0.1043 | likely_benign | 0.1054 | benign | -0.616 | Destabilizing | 0.775 | D | 0.373 | neutral | None | None | None | None | N |
A/T | 0.0933 | likely_benign | 0.1006 | benign | -0.613 | Destabilizing | 0.733 | D | 0.367 | neutral | None | None | None | None | N |
A/V | 0.138 | likely_benign | 0.1504 | benign | -0.336 | Destabilizing | 0.989 | D | 0.607 | neutral | None | None | None | None | N |
A/W | 0.8967 | likely_pathogenic | 0.9332 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/Y | 0.6287 | likely_pathogenic | 0.7086 | pathogenic | -0.656 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.