Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5747 | 17464;17465;17466 | chr2:178731527;178731526;178731525 | chr2:179596254;179596253;179596252 |
N2AB | 5430 | 16513;16514;16515 | chr2:178731527;178731526;178731525 | chr2:179596254;179596253;179596252 |
N2A | 4503 | 13732;13733;13734 | chr2:178731527;178731526;178731525 | chr2:179596254;179596253;179596252 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.722 | N | 0.611 | 0.159 | 0.195762928549 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6088 | likely_pathogenic | 0.6078 | pathogenic | -0.789 | Destabilizing | 0.989 | D | 0.642 | neutral | None | None | None | None | N |
A/D | 0.8818 | likely_pathogenic | 0.8962 | pathogenic | 0.109 | Stabilizing | 0.983 | D | 0.777 | deleterious | N | 0.488639076 | None | None | N |
A/E | 0.7653 | likely_pathogenic | 0.7768 | pathogenic | 0.12 | Stabilizing | 0.961 | D | 0.76 | deleterious | None | None | None | None | N |
A/F | 0.62 | likely_pathogenic | 0.6371 | pathogenic | -0.504 | Destabilizing | 0.923 | D | 0.783 | deleterious | None | None | None | None | N |
A/G | 0.342 | ambiguous | 0.3672 | ambiguous | -0.781 | Destabilizing | 0.84 | D | 0.609 | neutral | N | 0.470027842 | None | None | N |
A/H | 0.8745 | likely_pathogenic | 0.884 | pathogenic | -0.851 | Destabilizing | 0.996 | D | 0.748 | deleterious | None | None | None | None | N |
A/I | 0.2451 | likely_benign | 0.2546 | benign | 0.142 | Stabilizing | 0.011 | N | 0.407 | neutral | None | None | None | None | N |
A/K | 0.8938 | likely_pathogenic | 0.8973 | pathogenic | -0.588 | Destabilizing | 0.961 | D | 0.761 | deleterious | None | None | None | None | N |
A/L | 0.2747 | likely_benign | 0.3047 | benign | 0.142 | Stabilizing | 0.415 | N | 0.487 | neutral | None | None | None | None | N |
A/M | 0.3125 | likely_benign | 0.3431 | ambiguous | -0.151 | Destabilizing | 0.923 | D | 0.762 | deleterious | None | None | None | None | N |
A/N | 0.7727 | likely_pathogenic | 0.8042 | pathogenic | -0.427 | Destabilizing | 0.987 | D | 0.789 | deleterious | None | None | None | None | N |
A/P | 0.8762 | likely_pathogenic | 0.8955 | pathogenic | -0.025 | Destabilizing | 0.983 | D | 0.768 | deleterious | N | 0.488385586 | None | None | N |
A/Q | 0.7858 | likely_pathogenic | 0.7995 | pathogenic | -0.419 | Destabilizing | 0.987 | D | 0.77 | deleterious | None | None | None | None | N |
A/R | 0.838 | likely_pathogenic | 0.8387 | pathogenic | -0.516 | Destabilizing | 0.961 | D | 0.769 | deleterious | None | None | None | None | N |
A/S | 0.201 | likely_benign | 0.2203 | benign | -0.944 | Destabilizing | 0.722 | D | 0.618 | neutral | N | 0.470027842 | None | None | N |
A/T | 0.121 | likely_benign | 0.1312 | benign | -0.795 | Destabilizing | 0.722 | D | 0.611 | neutral | N | 0.455531211 | None | None | N |
A/V | 0.1027 | likely_benign | 0.1066 | benign | -0.025 | Destabilizing | 0.003 | N | 0.208 | neutral | N | 0.416628578 | None | None | N |
A/W | 0.9434 | likely_pathogenic | 0.9491 | pathogenic | -0.843 | Destabilizing | 0.996 | D | 0.78 | deleterious | None | None | None | None | N |
A/Y | 0.8149 | likely_pathogenic | 0.8273 | pathogenic | -0.374 | Destabilizing | 0.961 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.