Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5593 | 17002;17003;17004 | chr2:178732192;178732191;178732190 | chr2:179596919;179596918;179596917 |
N2AB | 5276 | 16051;16052;16053 | chr2:178732192;178732191;178732190 | chr2:179596919;179596918;179596917 |
N2A | 4349 | 13270;13271;13272 | chr2:178732192;178732191;178732190 | chr2:179596919;179596918;179596917 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.061 | N | 0.11 | 0.104 | 0.156986980423 | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | N | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99459E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.089 | likely_benign | 0.0953 | benign | -0.559 | Destabilizing | 0.061 | N | 0.11 | neutral | N | 0.499522974 | None | None | N |
S/C | 0.144 | likely_benign | 0.1682 | benign | -0.301 | Destabilizing | 0.999 | D | 0.423 | neutral | D | 0.530463349 | None | None | N |
S/D | 0.2519 | likely_benign | 0.2915 | benign | -0.014 | Destabilizing | 0.884 | D | 0.35 | neutral | None | None | None | None | N |
S/E | 0.3792 | ambiguous | 0.4076 | ambiguous | -0.015 | Destabilizing | 0.939 | D | 0.363 | neutral | None | None | None | None | N |
S/F | 0.1475 | likely_benign | 0.1751 | benign | -0.727 | Destabilizing | 0.996 | D | 0.535 | neutral | N | 0.49400135 | None | None | N |
S/G | 0.1217 | likely_benign | 0.1361 | benign | -0.813 | Destabilizing | 0.759 | D | 0.364 | neutral | None | None | None | None | N |
S/H | 0.2647 | likely_benign | 0.2986 | benign | -1.297 | Destabilizing | 0.991 | D | 0.437 | neutral | None | None | None | None | N |
S/I | 0.1559 | likely_benign | 0.1689 | benign | 0.005 | Stabilizing | 0.991 | D | 0.49 | neutral | None | None | None | None | N |
S/K | 0.5943 | likely_pathogenic | 0.6499 | pathogenic | -0.623 | Destabilizing | 0.939 | D | 0.354 | neutral | None | None | None | None | N |
S/L | 0.1047 | likely_benign | 0.1148 | benign | 0.005 | Stabilizing | 0.939 | D | 0.448 | neutral | None | None | None | None | N |
S/M | 0.2005 | likely_benign | 0.2138 | benign | 0.138 | Stabilizing | 0.999 | D | 0.425 | neutral | None | None | None | None | N |
S/N | 0.1276 | likely_benign | 0.1427 | benign | -0.524 | Destabilizing | 0.17 | N | 0.182 | neutral | None | None | None | None | N |
S/P | 0.8274 | likely_pathogenic | 0.8696 | pathogenic | -0.148 | Destabilizing | 0.988 | D | 0.395 | neutral | D | 0.523208421 | None | None | N |
S/Q | 0.4307 | ambiguous | 0.4687 | ambiguous | -0.603 | Destabilizing | 0.991 | D | 0.396 | neutral | None | None | None | None | N |
S/R | 0.4825 | ambiguous | 0.5431 | ambiguous | -0.578 | Destabilizing | 0.991 | D | 0.388 | neutral | None | None | None | None | N |
S/T | 0.0772 | likely_benign | 0.0788 | benign | -0.512 | Destabilizing | 0.826 | D | 0.449 | neutral | N | 0.488073829 | None | None | N |
S/V | 0.1656 | likely_benign | 0.1807 | benign | -0.148 | Destabilizing | 0.939 | D | 0.452 | neutral | None | None | None | None | N |
S/W | 0.2615 | likely_benign | 0.3223 | benign | -0.766 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
S/Y | 0.1371 | likely_benign | 0.1577 | benign | -0.484 | Destabilizing | 0.996 | D | 0.527 | neutral | N | 0.495976359 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.