Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17707 | 53344;53345;53346 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
N2AB | 16066 | 48421;48422;48423 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
N2A | 15139 | 45640;45641;45642 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
N2B | 8642 | 26149;26150;26151 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
Novex-1 | 8767 | 26524;26525;26526 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
Novex-2 | 8834 | 26725;26726;26727 | chr2:178607569;178607568;178607567 | chr2:179472296;179472295;179472294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.034 | N | 0.317 | 0.072 | 0.0762999501168 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41546E-04 | 0 | 0 | 0 |
T/N | rs2055199446 | None | 0.901 | N | 0.621 | 0.157 | 0.222439326576 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs2055199446 | None | 0.901 | N | 0.621 | 0.157 | 0.222439326576 | gnomAD-4.0.0 | 6.58874E-06 | None | None | None | None | N | None | 0 | 6.56168E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1187 | likely_benign | 0.0998 | benign | -0.972 | Destabilizing | 0.034 | N | 0.317 | neutral | N | 0.483221717 | None | None | N |
T/C | 0.4648 | ambiguous | 0.4464 | ambiguous | -0.438 | Destabilizing | 0.996 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/D | 0.4799 | ambiguous | 0.4576 | ambiguous | -0.122 | Destabilizing | 0.923 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/E | 0.2747 | likely_benign | 0.2544 | benign | 0.018 | Stabilizing | 0.633 | D | 0.645 | neutral | None | None | None | None | N |
T/F | 0.32 | likely_benign | 0.303 | benign | -0.834 | Destabilizing | 0.987 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/G | 0.2668 | likely_benign | 0.2474 | benign | -1.344 | Destabilizing | 0.633 | D | 0.643 | neutral | None | None | None | None | N |
T/H | 0.2766 | likely_benign | 0.2627 | benign | -1.437 | Destabilizing | 0.989 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/I | 0.2781 | likely_benign | 0.243 | benign | -0.023 | Destabilizing | 0.949 | D | 0.714 | prob.delet. | N | 0.496438943 | None | None | N |
T/K | 0.182 | likely_benign | 0.1678 | benign | -0.081 | Destabilizing | 0.011 | N | 0.426 | neutral | None | None | None | None | N |
T/L | 0.1372 | likely_benign | 0.1177 | benign | -0.023 | Destabilizing | 0.775 | D | 0.603 | neutral | None | None | None | None | N |
T/M | 0.0994 | likely_benign | 0.0937 | benign | -0.01 | Destabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/N | 0.1656 | likely_benign | 0.1555 | benign | -0.474 | Destabilizing | 0.901 | D | 0.621 | neutral | N | 0.465656068 | None | None | N |
T/P | 0.8067 | likely_pathogenic | 0.8197 | pathogenic | -0.306 | Destabilizing | 0.949 | D | 0.712 | prob.delet. | N | 0.488622168 | None | None | N |
T/Q | 0.18 | likely_benign | 0.174 | benign | -0.357 | Destabilizing | 0.858 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/R | 0.1659 | likely_benign | 0.1529 | benign | -0.232 | Destabilizing | 0.858 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/S | 0.1293 | likely_benign | 0.1144 | benign | -0.87 | Destabilizing | 0.034 | N | 0.434 | neutral | N | 0.430080665 | None | None | N |
T/V | 0.2031 | likely_benign | 0.1751 | benign | -0.306 | Destabilizing | 0.775 | D | 0.561 | neutral | None | None | None | None | N |
T/W | 0.615 | likely_pathogenic | 0.6129 | pathogenic | -0.829 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/Y | 0.3467 | ambiguous | 0.3401 | ambiguous | -0.485 | Destabilizing | 0.987 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.