Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1491 | 4696;4697;4698 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
N2AB | 1491 | 4696;4697;4698 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
N2A | 1491 | 4696;4697;4698 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
N2B | 1445 | 4558;4559;4560 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
Novex-1 | 1445 | 4558;4559;4560 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
Novex-2 | 1445 | 4558;4559;4560 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
Novex-3 | 1491 | 4696;4697;4698 | chr2:178777713;178777712;178777711 | chr2:179642440;179642439;179642438 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.581 | 0.71 | 0.659362306107 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9806 | likely_pathogenic | 0.9822 | pathogenic | -2.559 | Highly Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
F/C | 0.8767 | likely_pathogenic | 0.8801 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.722000431 | None | None | N |
F/D | 0.9943 | likely_pathogenic | 0.9943 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
F/E | 0.9881 | likely_pathogenic | 0.9888 | pathogenic | -1.752 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
F/G | 0.9893 | likely_pathogenic | 0.9897 | pathogenic | -2.95 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
F/H | 0.8566 | likely_pathogenic | 0.8583 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/I | 0.7505 | likely_pathogenic | 0.7774 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.746 | deleterious | D | 0.530773552 | None | None | N |
F/K | 0.9842 | likely_pathogenic | 0.9853 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
F/L | 0.9685 | likely_pathogenic | 0.9711 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.495897433 | None | None | N |
F/M | 0.8762 | likely_pathogenic | 0.8911 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
F/N | 0.9586 | likely_pathogenic | 0.9607 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
F/Q | 0.9653 | likely_pathogenic | 0.9657 | pathogenic | -1.733 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
F/R | 0.9606 | likely_pathogenic | 0.9624 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
F/S | 0.9463 | likely_pathogenic | 0.9477 | pathogenic | -2.483 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.536337113 | None | None | N |
F/T | 0.9643 | likely_pathogenic | 0.9669 | pathogenic | -2.231 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
F/V | 0.7988 | likely_pathogenic | 0.8144 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.60957921 | None | None | N |
F/W | 0.7553 | likely_pathogenic | 0.7745 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
F/Y | 0.228 | likely_benign | 0.2351 | benign | -0.561 | Destabilizing | 0.999 | D | 0.513 | neutral | N | 0.499988034 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.